Submodular Assay Panel Selection
Submodular Assay Panel Selection

This website implements the submodular assay panel selection framework as proposed in the paper "Choosing panels of genomics assays using submodular optimization". The current website supports SSA-future and SSA-past for choosing assay types. Source code for SSA and a pre-computed assay type similarity matrix are available here. Data for this web server is drawn from the NIH ENCODE Consortium.

Please choose the setting of assay panel selection that you wish to run.
Selection setting:
Cell type:
Assay types:
Preselected assay types:
Assay types to select from:
Panel size:


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